# Blast2GO CLI

Canonical: https://help.biobam.com/space/BCD/

- [Setup](https://help.biobam.com/space/BCD/190185504.md)
- [Command Line Parameters](https://help.biobam.com/space/BCD/190185563.md)
- [Blast2GO CLI Documentation](https://help.biobam.com/space/BCD/190349397.md)
- [User Manual 1.4.4](https://help.biobam.com/space/BCD/190349399.md)
- [Main Characteristics](https://help.biobam.com/space/BCD/190349402.md)
- [Main Features](https://help.biobam.com/space/BCD/190349441.md)
- [Generic Export](https://help.biobam.com/space/BCD/190775297.md)
- [Usage Examples](https://help.biobam.com/space/BCD/190808069.md)
- [Bibliography](https://help.biobam.com/space/BCD/190906385.md)
- [User Manual v.1.5](https://help.biobam.com/space/BCD/2239692845.md)
- [Introduction](https://help.biobam.com/space/BCD/2250407980.md)
- [Installation](https://help.biobam.com/space/BCD/2250407989.md)
- [Quickstart](https://help.biobam.com/space/BCD/2258829331.md)
- [Command Line Arguments](https://help.biobam.com/space/BCD/2259058711.md)
- [Load Project](https://help.biobam.com/space/BCD/2287534117.md)
- [Load Blast Results](https://help.biobam.com/space/BCD/2287534141.md)
- [Export Annotations](https://help.biobam.com/space/BCD/2287534179.md)
- [Save Sequence Table](https://help.biobam.com/space/BCD/2287534217.md)
- [Create Key File](https://help.biobam.com/space/BCD/2287534271.md)
- [Show License Info](https://help.biobam.com/space/BCD/2287534292.md)
- [Create Properties File](https://help.biobam.com/space/BCD/2287534310.md)
- [EC-Code Mapping](https://help.biobam.com/space/BCD/2287534328.md)
- [Gene Ontology Structure](https://help.biobam.com/space/BCD/2287534352.md)
- [EBI InterProScan](https://help.biobam.com/space/BCD/2287534388.md)
- [Local Blast](https://help.biobam.com/space/BCD/2287534413.md)
- [Temporary File Location](https://help.biobam.com/space/BCD/2287534459.md)
- [Load Fasta](https://help.biobam.com/space/BCD/2290221085.md)
- [Load Annotations](https://help.biobam.com/space/BCD/2290221135.md)
- [Load InterProScan Results](https://help.biobam.com/space/BCD/2290221147.md)
- [Save Project](https://help.biobam.com/space/BCD/2290221171.md)
- [Save Log File](https://help.biobam.com/space/BCD/2290221189.md)
- [Save Longest Open Reading Frame](https://help.biobam.com/space/BCD/2290221209.md)
- [Create PDF Report](https://help.biobam.com/space/BCD/2290221237.md)
- [Generic Data Export](https://help.biobam.com/space/BCD/2290221265.md)
- [Workspace Location](https://help.biobam.com/space/BCD/2290221283.md)
- [CloudBlast](https://help.biobam.com/space/BCD/2290221307.md)
- [CloudInterProScan](https://help.biobam.com/space/BCD/2290221335.md)
- [Cloud Unit Balance](https://help.biobam.com/space/BCD/2290221353.md)
- [Enzyme Data](https://help.biobam.com/space/BCD/2290221393.md)
- [Extract Sequence Data from Reference](https://help.biobam.com/space/BCD/2290221424.md)
- [GO-Slim](https://help.biobam.com/space/BCD/2290221439.md)
- [GO Mapping](https://help.biobam.com/space/BCD/2290221473.md)
- [Name Prefix for Outputs](https://help.biobam.com/space/BCD/2290221491.md)
- [Properties File](https://help.biobam.com/space/BCD/2290221512.md)
- [Charts and Statistics](https://help.biobam.com/space/BCD/2290221540.md)
- [GO Annotation](https://help.biobam.com/space/BCD/2290221560.md)
- [Load - Import](https://help.biobam.com/space/BCD/2310275086.md)
- [Analysis Options](https://help.biobam.com/space/BCD/2310406145.md)
- [Save - Export](https://help.biobam.com/space/BCD/2310930470.md)
- [Other Options](https://help.biobam.com/space/BCD/2311028745.md)
- [Older Versions](https://help.biobam.com/space/BCD/2344124597.md)
- [User Manual](https://help.biobam.com/space/BCD/2349138012.md)
- [Step-By-Step Tutorial for the Activation Process of the Blast2GO Command Line](https://help.biobam.com/space/BCD/3795910657.md)

---
Generated: 2026-09-17T23:37:23.889Z