# Blast2GO User Manual

Canonical: https://help.biobam.com/space/DOC/

- [Blast2GO Basic Quick Start Tutorial](https://help.biobam.com/space/DOC/694775.md)
- [Start - Load Sequences](https://help.biobam.com/space/DOC/694808.md)
- [blast - Basic Local Sequence Alignments](https://help.biobam.com/space/DOC/694877.md)
- [interpro - Protein Family and Domain based Annotations](https://help.biobam.com/space/DOC/792151.md)
- [mapping - Linking IDs to the Gene Ontology](https://help.biobam.com/space/DOC/792795.md)
- [annot - Gene Ontology Annotation with Blast2GO](https://help.biobam.com/space/DOC/792836.md)
- [charts - Result Visualization](https://help.biobam.com/space/DOC/792878.md)
- [Gene Ontology Graphs](https://help.biobam.com/space/DOC/792925.md)
- [graphs - Gene Ontology Visualization](https://help.biobam.com/space/DOC/792961.md)
- [select - Select Sequences](https://help.biobam.com/space/DOC/793018.md)
- [Analysis Menu](https://help.biobam.com/space/DOC/793065.md)
- [RNA-Seq](https://help.biobam.com/space/DOC/793130.md)
- [Gene Finding](https://help.biobam.com/space/DOC/793198.md)
- [Tools (PRO Feature)](https://help.biobam.com/space/DOC/793242.md)
- [View Menu](https://help.biobam.com/space/DOC/793265.md)
- [Help Menu](https://help.biobam.com/space/DOC/793281.md)
- [File Menu](https://help.biobam.com/space/DOC/793303.md)
- [Troubleshooting](https://help.biobam.com/space/DOC/793322.md)
- [Installation and Activation](https://help.biobam.com/space/DOC/794040.md)
- [Pairwise Differential Expression Analysis - PRO Feature](https://help.biobam.com/space/DOC/800520.md)
- [Time Course Expression Analysis - PRO Feature](https://help.biobam.com/space/DOC/800615.md)
- [Prokaryotic Gene Finding by Glimmer - PRO Feature](https://help.biobam.com/space/DOC/800683.md)
- [Eukaryotic Gene Finding by Augustus - PRO Feature](https://help.biobam.com/space/DOC/800758.md)
- [Gene-level Quantification - PRO Feature](https://help.biobam.com/space/DOC/801485.md)
- [Enrichment Analysis - Fisher's Exact Test](https://help.biobam.com/space/DOC/813312.md)
- [Gene Set Enrichment Analysis (GSEA) - PRO Feature](https://help.biobam.com/space/DOC/813639.md)
- [RFAM - PRO Feature](https://help.biobam.com/space/DOC/813714.md)
- [Internal Stuff](https://help.biobam.com/space/DOC/833605.md)
- [User Manual](https://help.biobam.com/space/DOC/41975809.md)
- [Blast2GO Basic User Manual](https://help.biobam.com/space/DOC/42074113.md)
- [Support](https://help.biobam.com/space/DOC/42237973.md)
- [Transcript-level Quantification - PRO Feature](https://help.biobam.com/space/DOC/44302337.md)
- [Workflows (PRO Feature)](https://help.biobam.com/space/DOC/136871939.md)
- [GFF Viewer](https://help.biobam.com/space/DOC/167673886.md)
- [FASTQ Quality Check](https://help.biobam.com/space/DOC/366346472.md)
- [Genome Browser](https://help.biobam.com/space/DOC/392953947.md)
- [RNA-Seq de novo Assembly](https://help.biobam.com/space/DOC/414285837.md)
- [Venn Diagram](https://help.biobam.com/space/DOC/531333140.md)
- [FASTQ Preprocessing](https://help.biobam.com/space/DOC/533725200.md)
- [Toolbar](https://help.biobam.com/space/DOC/3558637594.md)
- [Main Menu](https://help.biobam.com/space/DOC/3559161870.md)
- [User Interface](https://help.biobam.com/space/DOC/3559718922.md)

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Generated: 2026-09-15T03:52:36.795Z